Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888262.1_cds_XP_016442831.1_38052
CDS Infomation

[gene=LOC107768237] [db_xref=GeneID:107768237] [protein=putative late blight resistance protein homolog R1A-4 isoform X2] [protein_id=XP_016442831.1] [location=join(6063..8225,8327..8344)] [gbkey=CDS]
Sequence

ATGTCATCTGTTCCTACTGATATTCGTGATTCTGTACTTGCTCTCCAAGGGATTGAAAAT
GAGCATGACTTGATAGCTTCCCAAAAGGATCGGATAAAGGCCATTAAAACAGAACTATGG
TTTCTGAAAACATTTCTTGACTGGAAGGGAAAGCAGAATCGGAAGAAGCTTATGGCCCTG
CAAAAACATGTCAAACCATTGATGAAAAGTGTTGGAGATGATCTGCGTGACCTCTTTAAG
AGCATATGGTGTAGAAAAGACGAGCCTGATCAACTTGACACCATCACCACTGATGTGCTA
AAAAAGATTCGGCTTTCCAAGCCAGATATTAGAGTTTATTATTCTTATCCAGAAATTCCA
GGTGCTAGTTCTCTGACCCACGAACTTGTAGTGGAATTCATAAACAATGTTGTACGGAAT
CTTAGGGATCTGCTGATTGCTCGACTTGGGGAGCTGCTTGCTATGCCTGATGATTCAGAT
AACATATATTTTCAAGTCAAGGATCAAATGAAAGTGTTAGTAAAGGAGTTGACAGTACTC
AAGAAGTTTGTTTGTTTTCTGGGAACAATATATAGCCCAGAACTCGAAAGCTGCTGGAAA
GCTTTCCTCTCTCATGCTGAAGTTGTGGCAACCAATGCTGCAACTGTTTGCTTCTTCTAT
TTGCCTGATTCCGACGAGGACAAATCTGTGGCTCTTAGAATTGCTAATTCGCTTATTGAT
TGCTGCAGAAAAGGATTGAGCCTATTGAGCCACAGATTCGCAACATCTACGCTGATGTCA
AGATTATCAGGCAGTCCTCCCATGTCCTCTACAACACTTTTAACTTTGGATAAGGACCAA
ACTGAAACCCTTCCGGATCAGCTTAAGTCATCGAGAATTATTCTCAATGAGTTGTCATTG
ATTAACAGCATTCAGGATGAGATGAGGAACCGTTTCTTCACACGGCTTGAGAATGTGGCT
GTTGATGCTGGACTTGTCATTTATTCATTGTATGACAGCAGCAAAGACAAGGAACATCAG
AAGCAAGAACTGATTGTTTTAGCTGATACAGTTCAGCTTGTCAAGACACAAGTTAACCGT
GATATCCGGGAGTGGGTACAATCCCATTTGCCTAAAAATGATTCATTAGGCTCTATCAAT
TTCCTTATGGAGAGCTTAAAGGGACTCATTTGTTGCCCTGCTGATTCACTTACTTCGGTG
AAGAACCAACTCGAACTGGTCCATGAGGAGCTTGAATTTCTCCAACCTTTACTCAAGGGT
GCAGCAGAACCAAGCAATAATAAGTATGATGAAATTCAAGATATAGCTGCAAGAGTCATT
GATAATGCACATGAGTTAGAGGATACAATAGATTCTTTGAAAGTTAGAGATATTCCTCTT
TCGTATTTTAAAATATGGCTCTCGGTGATGACAGAAGAGATTAAGATTGTTAAGACAGAG
TTGCCTAAGTCCGAGAAGAAGGAAATAACAATTGTTTCCCCTGCTACCAATGACGAAGAA
CCTGTGGGCTTCTTGGATGTGAAGGAAACCATAAGAGGCCAACTAGTTGGAGGACCACAC
CAGCTAGAAGTTATCTCCATAGTTGGTATGCCTGAATTAGGAAAAACGACCTTGGCCAGA
AGTTTTATGAATGATCAGTCAATTGTCTCCCATTTCAATTTCCAAGGTGAGTGTCGTGTT
TCTCAGGTATACACGCGTAAAGACTTGCTACTTTCCATCTTGAGTGATGCTACTCATGAG
CCTATTGATCTAAGTAAAGAAGGTGAAAGTGAATTAGCTGCTAGACTAAAACAAACATTA
ATGAGAAGAAGATATCTTCTTATTATTGACAATGTGTGGGAGAAAGATGCATGGGATGAT
CTAAGATTATGCTTTCCTGATGATGATAACGGCAGTAGAATCATTCTGACCACCAGACTG
TGGGAAGTTGCTCTTTACGCCAAACGTTCCACTGATCCCCATGATCTACGTTTGTTTAAT
AATGACGAAAGTTGGTCCTTATTACAAAGAAAGGTGTTTGGGGAAGAAAAGTGCCCTGAA
GAGCTAAAGCAAGTTGGGCAAGAAATAGCAAAAAAGTGTAAAGGGCTACCTCTTTCGGTT
GTTTTAGTGGCTGGTCTCCTCTCAAGGATGGATAAGGAAGAAAAATGTTGGAAGCAATTG
GAAAGTATTTTTAGAGGATAG

Peptide Sequence

PEP ID

XP_016442831.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1A-4 isoform X2 [Nicotiana tabacum]
Sequence

MSSVPTDIRDSVLALQGIENEHDLIASQKDRIKAIKTELWFLKTFLDWKGKQNRKKLMAL
QKHVKPLMKSVGDDLRDLFKSIWCRKDEPDQLDTITTDVLKKIRLSKPDIRVYYSYPEIP
GASSLTHELVVEFINNVVRNLRDLLIARLGELLAMPDDSDNIYFQVKDQMKVLVKELTVL
KKFVCFLGTIYSPELESCWKAFLSHAEVVATNAATVCFFYLPDSDEDKSVALRIANSLID
CCRKGLSLLSHRFATSTLMSRLSGSPPMSSTTLLTLDKDQTETLPDQLKSSRIILNELSL
INSIQDEMRNRFFTRLENVAVDAGLVIYSLYDSSKDKEHQKQELIVLADTVQLVKTQVNR
DIREWVQSHLPKNDSLGSINFLMESLKGLICCPADSLTSVKNQLELVHEELEFLQPLLKG
AAEPSNNKYDEIQDIAARVIDNAHELEDTIDSLKVRDIPLSYFKIWLSVMTEEIKIVKTE
LPKSEKKEITIVSPATNDEEPVGFLDVKETIRGQLVGGPHQLEVISIVGMPELGKTTLAR
SFMNDQSIVSHFNFQGECRVSQVYTRKDLLLSILSDATHEPIDLSKEGESELAARLKQTL
MRRRYLLIIDNVWEKDAWDDLRLCFPDDDNGSRIILTTRLWEVALYAKRSTDPHDLRLFN
NDESWSLLQRKVFGEEKCPEELKQVGQEIAKKCKGLPLSVVLVAGLLSRMDKEEKCWKQL
ESIFRG

Transcript Sequence

Gene sequence data has not been registered.